Bio3D is a package written for the R platform. Details are in thegrantlab.org/bio3d/index.php
library(bio3d, lib.loc = "~/R")
library(bio3d, lib.loc = "~/R")
pdb < - read.pdb("File.pdb")
atom.select(pdb,"calpha")$atom ---- Gives the atom index of all alpha carbons
pdb$atom$resid -- Gives the residue ID of all atoms
pdb$atom$resid(atom.select(pdb,"calpha")$atom) --- Combines the two
Inspiring and very useful, highly recommended for all bloggers out there.
ReplyDeletenumpy arctan2
Online Community Management Software Great post i must say and thanks for the information. Education is definitely a sticky subject. However, is still among the leading topics of our time. I appreciate your post and look forward to more.
ReplyDeleteNice post! This is a very nice blog that I will definitively come back to more times this year! Thanks for informative post. winanp pro crack
ReplyDeletePretty good post. I just stumbled upon your blog and wanted to say that I have really enjoyed reading your blog posts. Any way I'll be subscribing to your feed and I hope you post again soon. Big thanks for the useful info. Sharepoint employee directory
ReplyDeletelinkedin automation software Pretty good post. I just stumbled upon your blog and wanted to say that I have really enjoyed reading your blog posts. Any way I'll be subscribing to your feed and I hope you post again soon. Big thanks for the useful info.
ReplyDelete